Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TBC1D3BA6NDS4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 AC107918.2-201ENST00000530817 355 ntBASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 AC022145.2-201ENST00000598203 171 ntBASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 AC093028.1-201ENST00000622998 982 ntBASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.37■□□□□ 0.37
TBC1D3BA6NDS4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 AL671277.1-201ENST00000429656 993 ntBASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 TIMM8BP1-201ENST00000452384 211 ntBASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3BA6NDS4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3BA6NDS4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3BA6NDS4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.35■□□□□ 0.37
TBC1D3BA6NDS4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3BA6NDS4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TBC1D3BA6NDS4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3BA6NDS4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.35■□□□□ 0.37
TBC1D3BA6NDS4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3BA6NDS4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3BA6NDS4 AL139400.1-201ENST00000366220 510 ntBASIC17.35■□□□□ 0.37
TBC1D3BA6NDS4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3BA6NDS4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.35■□□□□ 0.37
TBC1D3BA6NDS4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms