Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 RNF216P1-203ENST00000404404 2427 ntBASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 VENTXP7-201ENST00000475503 772 ntBASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 AC009533.2-201ENST00000543664 586 ntBASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 AL353593.2-201ENST00000602529 1483 ntBASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 AL603756.1-201ENST00000606511 2163 ntBASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 AL135999.2-201ENST00000622438 1686 ntBASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00959A0A1B0GUT2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 AC078925.2-201ENST00000624013 1973 ntBASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 AC009336.1-201ENST00000608941 1553 ntBASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 AL845331.1-201ENST00000424978 1190 ntBASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 AC246785.2-201ENST00000432512 513 ntBASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 KRT8P26-201ENST00000534154 1276 ntBASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LINC00959A0A1B0GUT2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms