Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 GK-202ENST00000378941 458 ntTSL 3 BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 GAPDHP21-201ENST00000450301 1010 ntBASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 ALG1L8P-201ENST00000533887 760 ntBASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 AC012317.2-201ENST00000623305 2251 ntBASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 AP000842.3-202ENST00000569238 1080 ntBASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 AC008267.7-201ENST00000624570 1194 ntBASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
HCFC2Q9Y5Z7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 BICD1-207ENST00000551848 1962 ntBASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 AC092580.3-201ENST00000430932 139 ntBASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.81■□□□□ 0.44
HCFC2Q9Y5Z7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 ABALON-201ENST00000629058 1903 ntBASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 RNU1-129P-201ENST00000384064 167 ntBASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 HCG4-201ENST00000418983 998 ntBASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.8■□□□□ 0.44
HCFC2Q9Y5Z7 HLA-J-202ENST00000469281 1241 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms