Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAPPC1Q9Y5R8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 AC138969.2-201ENST00000532739 9932 ntBASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 C1QL1P1-201ENST00000568105 661 ntBASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 AC138035.3-201ENST00000622706 2791 ntBASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 AC132938.6-201ENST00000623828 1655 ntBASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 LINC01311-201ENST00000565162 1445 ntBASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAPPC1Q9Y5R8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAPPC1Q9Y5R8 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms