Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 AC012306.2-201ENST00000609350 630 ntBASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 FLJ16779-201ENST00000612722 7638 ntBASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGB4Q9UN71 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 MST1L-201ENST00000442552 2185 ntBASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 MIR662-201ENST00000384847 95 ntBASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 AC117947.1-201ENST00000427448 529 ntBASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 MTCL1P1-201ENST00000446207 792 ntBASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB4Q9UN71 AC007950.2-201ENST00000615045 2347 ntBASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 AC005521.1-201ENST00000393351 872 ntBASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 AC092647.4-201ENST00000457211 535 ntBASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 LINC01023-201ENST00000606054 436 ntBASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB4Q9UN71 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.71■□□□□ 0.26
PCDHGB4Q9UN71 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGB4Q9UN71 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGB4Q9UN71 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGB4Q9UN71 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
PCDHGB4Q9UN71 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGB4Q9UN71 AC016396.2-201ENST00000562575 1417 ntBASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB4Q9UN71 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms