Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 FAM197Y3-203ENST00000618346 717 ntBASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 AC016396.2-201ENST00000562575 1417 ntBASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VAT1LQ9HCJ6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
VAT1LQ9HCJ6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.89■□□□□ 0.78
VAT1LQ9HCJ6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.89■□□□□ 0.78
VAT1LQ9HCJ6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
VAT1LQ9HCJ6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
VAT1LQ9HCJ6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 MRPL20P1-201ENST00000400819 433 ntBASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 VN2R19P-201ENST00000442399 1052 ntBASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 AC064836.3-201ENST00000607928 673 ntBASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 GGTLC5P-201ENST00000617623 998 ntBASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 AC093525.9-201ENST00000624961 1746 ntBASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAT1LQ9HCJ6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
VAT1LQ9HCJ6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VAT1LQ9HCJ6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.87■□□□□ 0.77
VAT1LQ9HCJ6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAT1LQ9HCJ6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.87■□□□□ 0.77
VAT1LQ9HCJ6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAT1LQ9HCJ6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAT1LQ9HCJ6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAT1LQ9HCJ6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
VAT1LQ9HCJ6 AC023274.1-201ENST00000418278 595 ntBASIC19.87■□□□□ 0.77
VAT1LQ9HCJ6 AL591424.1-201ENST00000442569 1213 ntBASIC19.87■□□□□ 0.77
VAT1LQ9HCJ6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms