Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 TPSP2-201ENST00000561760 610 ntBASIC16.56■□□□□ 0.24
TUBB1Q9H4B7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.56■□□□□ 0.24
TUBB1Q9H4B7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TUBB1Q9H4B7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TUBB1Q9H4B7 AC116407.4-201ENST00000623319 1061 ntBASIC16.56■□□□□ 0.24
TUBB1Q9H4B7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBB1Q9H4B7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBB1Q9H4B7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBB1Q9H4B7 HLA-A-202ENST00000376806 1854 ntBASIC16.56■□□□□ 0.24
TUBB1Q9H4B7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBB1Q9H4B7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TUBB1Q9H4B7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBB1Q9H4B7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBB1Q9H4B7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBB1Q9H4B7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBB1Q9H4B7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBB1Q9H4B7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 RCN1P2-201ENST00000398357 915 ntBASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 LINC02199-201ENST00000506655 2702 ntBASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBB1Q9H4B7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 KRT18P1-202ENST00000452408 1331 ntBASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 DRAXINP1-201ENST00000437611 948 ntBASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 TSSC2-201ENST00000450217 709 ntBASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms