Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM2Q9C040 AC096582.2-201ENST00000510860 516 ntBASIC15.85■□□□□ 0.13
TRIM2Q9C040 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM2Q9C040 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM2Q9C040 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM2Q9C040 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM2Q9C040 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM2Q9C040 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM2Q9C040 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.85■□□□□ 0.13
TRIM2Q9C040 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM2Q9C040 AC073592.5-201ENST00000624854 528 ntBASIC15.85■□□□□ 0.13
TRIM2Q9C040 INTS4P1-201ENST00000438455 1935 ntBASIC15.85■□□□□ 0.13
TRIM2Q9C040 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
TRIM2Q9C040 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM2Q9C040 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM2Q9C040 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM2Q9C040 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM2Q9C040 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM2Q9C040 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM2Q9C040 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM2Q9C040 AC132938.5-201ENST00000624980 1813 ntBASIC15.84■□□□□ 0.13
TRIM2Q9C040 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM2Q9C040 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM2Q9C040 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM2Q9C040 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM2Q9C040 AL135999.2-201ENST00000622438 1686 ntBASIC15.84■□□□□ 0.13
TRIM2Q9C040 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM2Q9C040 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 POM121L3P-201ENST00000419331 1163 ntBASIC15.84■□□□□ 0.13
TRIM2Q9C040 IGHV3-47-201ENST00000425060 335 ntBASIC15.84■□□□□ 0.13
TRIM2Q9C040 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM2Q9C040 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM2Q9C040 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 AC124947.2-201ENST00000547118 1133 ntBASIC15.84■□□□□ 0.13
TRIM2Q9C040 BNIP3P18-201ENST00000593976 575 ntBASIC15.84■□□□□ 0.13
TRIM2Q9C040 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM2Q9C040 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM2Q9C040 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM2Q9C040 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM2Q9C040 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM2Q9C040 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM2Q9C040 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM2Q9C040 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM2Q9C040 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM2Q9C040 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM2Q9C040 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
TRIM2Q9C040 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
TRIM2Q9C040 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.83■□□□□ 0.13
TRIM2Q9C040 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM2Q9C040 EGFEM1P-202ENST00000431685 1563 ntBASIC15.83■□□□□ 0.13
TRIM2Q9C040 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM2Q9C040 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM2Q9C040 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM2Q9C040 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM2Q9C040 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM2Q9C040 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRIM2Q9C040 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM2Q9C040 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 AC104819.1-201ENST00000504587 486 ntBASIC15.83■□□□□ 0.12
TRIM2Q9C040 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 AC074051.2-201ENST00000565115 352 ntBASIC15.83■□□□□ 0.12
TRIM2Q9C040 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM2Q9C040 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM2Q9C040 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM2Q9C040 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 NKILA-202ENST00000614771 2598 ntBASIC15.83■□□□□ 0.12
TRIM2Q9C040 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM2Q9C040 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM2Q9C040 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM2Q9C040 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms