Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THUMPD3Q9BV44 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 AL603756.1-201ENST00000606511 2163 ntBASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 MYCLP1-201ENST00000372451 1075 ntBASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 COX5BP2-201ENST00000392354 334 ntBASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 GPR32P1-201ENST00000601788 811 ntBASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 AC083849.1-201ENST00000615227 514 ntBASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 DOC2GP-204ENST00000639052 2548 ntBASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
THUMPD3Q9BV44 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 RNF216P1-203ENST00000404404 2427 ntBASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 IGHV3-52-201ENST00000519770 353 ntBASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
THUMPD3Q9BV44 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms