Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 SLC25A6P2-201ENST00000497974 877 ntBASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 AC098614.1-201ENST00000368528 745 ntBASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 LINC00982-205ENST00000420957 435 ntBASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 AC103564.2-201ENST00000432853 1299 ntBASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.48□□□□□ -0.09
CSMD1Q96PZ7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 AP000997.3-201ENST00000623333 2250 ntBASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 REXO1L9P-201ENST00000604264 2108 ntBASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 AC009336.1-201ENST00000608941 1553 ntBASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 MIR6727-201ENST00000620702 65 ntBASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 AC129492.6-201ENST00000611383 1305 ntBASIC14.47□□□□□ -0.09
CSMD1Q96PZ7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms