Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF48Q96MX3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF48Q96MX3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 MRPL20P1-201ENST00000400819 433 ntBASIC13.99□□□□□ -0.17
ZNF48Q96MX3 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 AC002558.1-201ENST00000488906 803 ntBASIC13.99□□□□□ -0.17
ZNF48Q96MX3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 OR7E47P-204ENST00000575924 449 ntBASIC13.99□□□□□ -0.17
ZNF48Q96MX3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 AL078644.1-201ENST00000609881 752 ntBASIC13.99□□□□□ -0.17
ZNF48Q96MX3 AC010654.1-201ENST00000615722 808 ntBASIC13.99□□□□□ -0.17
ZNF48Q96MX3 AC010507.1-201ENST00000633895 436 ntBASIC13.99□□□□□ -0.17
ZNF48Q96MX3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 AC012317.2-201ENST00000623305 2251 ntBASIC13.99□□□□□ -0.17
ZNF48Q96MX3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF48Q96MX3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 HTR5BP-201ENST00000430851 1154 ntBASIC13.98□□□□□ -0.17
ZNF48Q96MX3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 C20orf181-201ENST00000623918 480 ntBASIC13.98□□□□□ -0.17
ZNF48Q96MX3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 AC133963.1-201ENST00000504166 1679 ntBASIC13.98□□□□□ -0.17
ZNF48Q96MX3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ZNF48Q96MX3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms