Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL031432.2-201ENST00000566714 459 ntBASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 AL928711.1-201ENST00000570165 459 ntBASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 PP12613-201ENST00000424958 2230 ntBASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SHKBP1Q8TBC3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 CNN2P11-201ENST00000429351 262 ntBASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHKBP1Q8TBC3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.47
SHKBP1Q8TBC3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SHKBP1Q8TBC3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.02■□□□□ 0.47
SHKBP1Q8TBC3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SHKBP1Q8TBC3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SHKBP1Q8TBC3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.02■□□□□ 0.47
SHKBP1Q8TBC3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SHKBP1Q8TBC3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.02■□□□□ 0.47
SHKBP1Q8TBC3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.02■□□□□ 0.47
SHKBP1Q8TBC3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 AC074386.1-202ENST00000463561 864 ntBASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 AC023141.13-201ENST00000604991 943 ntBASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SHKBP1Q8TBC3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 AC108860.2-201ENST00000562760 2183 ntBASIC18■□□□□ 0.47
SHKBP1Q8TBC3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 FAM58CP-201ENST00000435741 640 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms