Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 AL589182.2-201ENST00000619332 1049 ntBASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 AC012313.10-201ENST00000623509 926 ntBASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 FRMD8P1-201ENST00000440433 1524 ntBASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDRT4Q8N9R6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 AKR1C7P-201ENST00000305623 895 ntBASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 AL353135.1-201ENST00000606729 504 ntBASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 IFNL4P1-201ENST00000607083 540 ntBASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.97■□□□□ 0.15
CDRT4Q8N9R6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 SART3-203ENST00000546611 1184 ntBASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 PCDHA12-202ENST00000613593 2588 ntBASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT4Q8N9R6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CDRT4Q8N9R6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.96■□□□□ 0.14
CDRT4Q8N9R6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDRT4Q8N9R6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDRT4Q8N9R6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDRT4Q8N9R6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT4Q8N9R6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT4Q8N9R6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT4Q8N9R6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDRT4Q8N9R6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDRT4Q8N9R6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT4Q8N9R6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.95■□□□□ 0.14
CDRT4Q8N9R6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms