Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC083880.1-201ENST00000608266 535 ntBASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 KSR1P1-201ENST00000446298 240 ntBASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 AL353708.3-201ENST00000610272 989 ntBASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.61■□□□□ 0.09
CROCCP3Q8IVE0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 MTDHP1-201ENST00000605323 784 ntBASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.6■□□□□ 0.09
CROCCP3Q8IVE0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms