Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 MIR662-201ENST00000384847 95 ntBASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 AP003733.1-201ENST00000491725 852 ntBASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 AC006011.2-201ENST00000621313 1158 ntBASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTCHD4Q6ZW05 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 PCDHA1-201ENST00000378133 2726 ntBASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 HBZP1-201ENST00000354915 429 ntBASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 TSPY5P-201ENST00000426936 936 ntBASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 AL359075.1-203ENST00000462729 1002 ntBASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 ZNF444P1-201ENST00000559497 298 ntBASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 AC078925.2-201ENST00000624013 1973 ntBASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 AL353692.3-201ENST00000407031 1396 ntBASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 AC006449.5-201ENST00000610658 2098 ntBASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTCHD4Q6ZW05 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 AC092171.3-201ENST00000610122 2651 ntBASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms