Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.04■□□□□ -0
FAM27BQ5VT28 AC025062.2-201ENST00000605477 670 ntBASIC15.04■□□□□ -0
FAM27BQ5VT28 AC004706.3-202ENST00000621574 984 ntBASIC15.04■□□□□ -0
FAM27BQ5VT28 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
FAM27BQ5VT28 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
FAM27BQ5VT28 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FAM27BQ5VT28 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FAM27BQ5VT28 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
FAM27BQ5VT28 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FAM27BQ5VT28 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FAM27BQ5VT28 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
FAM27BQ5VT28 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
FAM27BQ5VT28 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FAM27BQ5VT28 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.04■□□□□ -0
FAM27BQ5VT28 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FAM27BQ5VT28 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.03■□□□□ -0
FAM27BQ5VT28 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
FAM27BQ5VT28 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.03■□□□□ -0
FAM27BQ5VT28 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.03■□□□□ -0
FAM27BQ5VT28 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.03■□□□□ -0
FAM27BQ5VT28 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.03■□□□□ -0
FAM27BQ5VT28 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.03■□□□□ -0
FAM27BQ5VT28 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.03■□□□□ -0
FAM27BQ5VT28 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.03■□□□□ -0
FAM27BQ5VT28 EMBP1-201ENST00000458200 901 ntBASIC15.03■□□□□ -0
FAM27BQ5VT28 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.03■□□□□ -0
FAM27BQ5VT28 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.03■□□□□ -0
FAM27BQ5VT28 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
FAM27BQ5VT28 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.03■□□□□ -0
FAM27BQ5VT28 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.03■□□□□ -0
FAM27BQ5VT28 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 PCDHA12-202ENST00000613593 2588 ntBASIC15.03■□□□□ -0
FAM27BQ5VT28 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.03■□□□□ -0
FAM27BQ5VT28 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.03■□□□□ -0
FAM27BQ5VT28 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
FAM27BQ5VT28 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.03■□□□□ -0
FAM27BQ5VT28 AC105020.1-201ENST00000435356 2205 ntBASIC15.02■□□□□ -0
FAM27BQ5VT28 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.02■□□□□ -0
FAM27BQ5VT28 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FAM27BQ5VT28 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FAM27BQ5VT28 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.02■□□□□ -0
FAM27BQ5VT28 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FAM27BQ5VT28 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
FAM27BQ5VT28 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.02■□□□□ -0
FAM27BQ5VT28 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FAM27BQ5VT28 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
FAM27BQ5VT28 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FAM27BQ5VT28 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.02■□□□□ -0
FAM27BQ5VT28 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FAM27BQ5VT28 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.02■□□□□ -0
FAM27BQ5VT28 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.02■□□□□ -0
FAM27BQ5VT28 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.02■□□□□ -0
FAM27BQ5VT28 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.02■□□□□ -0
FAM27BQ5VT28 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
FAM27BQ5VT28 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
FAM27BQ5VT28 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.02■□□□□ -0
FAM27BQ5VT28 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.02■□□□□ -0
FAM27BQ5VT28 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FAM27BQ5VT28 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FAM27BQ5VT28 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.02■□□□□ -0
FAM27BQ5VT28 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.02■□□□□ -0
FAM27BQ5VT28 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.02■□□□□ -0
FAM27BQ5VT28 LAGE3P1-201ENST00000425356 484 ntBASIC15.02■□□□□ -0
FAM27BQ5VT28 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.02■□□□□ -0
FAM27BQ5VT28 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.02■□□□□ -0
FAM27BQ5VT28 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.02■□□□□ -0
FAM27BQ5VT28 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.02■□□□□ -0
FAM27BQ5VT28 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.02■□□□□ -0
FAM27BQ5VT28 AL121912.1-201ENST00000603683 238 ntBASIC15.02■□□□□ -0
FAM27BQ5VT28 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
FAM27BQ5VT28 AC107918.4-202ENST00000641623 219 ntBASIC15.02■□□□□ -0
FAM27BQ5VT28 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.02□□□□□ -0.01
FAM27BQ5VT28 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
FAM27BQ5VT28 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FAM27BQ5VT28 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
FAM27BQ5VT28 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
FAM27BQ5VT28 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
FAM27BQ5VT28 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
FAM27BQ5VT28 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.02□□□□□ -0.01
FAM27BQ5VT28 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FAM27BQ5VT28 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.02□□□□□ -0.01
FAM27BQ5VT28 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FAM27BQ5VT28 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FAM27BQ5VT28 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms