Protein–RNA interactions for Protein: Q5SZB4

C9orf50, Uncharacterized protein C9orf50, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50Q5SZB4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
C9orf50Q5SZB4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
C9orf50Q5SZB4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
C9orf50Q5SZB4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
C9orf50Q5SZB4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
C9orf50Q5SZB4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
C9orf50Q5SZB4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
C9orf50Q5SZB4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
C9orf50Q5SZB4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
C9orf50Q5SZB4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
C9orf50Q5SZB4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 MIR6775-201ENST00000617557 69 ntBASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 FOXO1B-201ENST00000504678 1527 ntBASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
C9orf50Q5SZB4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 KRT223P-202ENST00000449164 1292 ntBASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 DOC2GP-202ENST00000514950 1163 ntBASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 AC073389.1-201ENST00000595595 795 ntBASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 RN7SL828P-201ENST00000607615 303 ntBASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 AC099568.2-201ENST00000609194 695 ntBASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 AC068587.10-201ENST00000641210 219 ntBASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.16■□□□□ 0.5
C9orf50Q5SZB4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf50Q5SZB4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.15■□□□□ 0.5
C9orf50Q5SZB4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf50Q5SZB4 AC073130.3-201ENST00000624389 2278 ntBASIC18.15■□□□□ 0.5
C9orf50Q5SZB4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf50Q5SZB4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf50Q5SZB4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
C9orf50Q5SZB4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf50Q5SZB4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
C9orf50Q5SZB4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
C9orf50Q5SZB4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf50Q5SZB4 AC004945.1-201ENST00000416738 983 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms