Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN20Q4JDL3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 AC243591.1-201ENST00000452967 1364 ntBASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 AC106886.4-201ENST00000623557 2502 ntBASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN20Q4JDL3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 AC006557.2-201ENST00000592985 1240 ntBASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPN20Q4JDL3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms