Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
AP3S2P59780 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S2P59780 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S2P59780 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
AP3S2P59780 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S2P59780 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S2P59780 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.82□□□□□ -0.04
AP3S2P59780 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
AP3S2P59780 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.82□□□□□ -0.04
AP3S2P59780 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.82□□□□□ -0.04
AP3S2P59780 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
AP3S2P59780 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S2P59780 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.82□□□□□ -0.04
AP3S2P59780 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP3S2P59780 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
AP3S2P59780 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.81□□□□□ -0.04
AP3S2P59780 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
AP3S2P59780 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
AP3S2P59780 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.81□□□□□ -0.04
AP3S2P59780 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
AP3S2P59780 SLC25A1P3-201ENST00000395415 828 ntBASIC14.81□□□□□ -0.04
AP3S2P59780 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.81□□□□□ -0.04
AP3S2P59780 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 AC069152.1-201ENST00000438030 544 ntBASIC14.81□□□□□ -0.04
AP3S2P59780 AC113404.2-201ENST00000507884 177 ntBASIC14.81□□□□□ -0.04
AP3S2P59780 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.81□□□□□ -0.04
AP3S2P59780 CR769767.2-201ENST00000622735 460 ntBASIC14.81□□□□□ -0.04
AP3S2P59780 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.81□□□□□ -0.04
AP3S2P59780 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.81□□□□□ -0.04
AP3S2P59780 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.81□□□□□ -0.04
AP3S2P59780 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.81□□□□□ -0.04
AP3S2P59780 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
AP3S2P59780 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.81□□□□□ -0.04
AP3S2P59780 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
AP3S2P59780 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.81□□□□□ -0.04
AP3S2P59780 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP3S2P59780 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.8□□□□□ -0.04
AP3S2P59780 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S2P59780 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
AP3S2P59780 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S2P59780 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
AP3S2P59780 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.8□□□□□ -0.04
AP3S2P59780 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.8□□□□□ -0.04
AP3S2P59780 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S2P59780 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S2P59780 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S2P59780 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.8□□□□□ -0.04
AP3S2P59780 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.8□□□□□ -0.04
AP3S2P59780 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.8□□□□□ -0.04
AP3S2P59780 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S2P59780 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
AP3S2P59780 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.8□□□□□ -0.04
AP3S2P59780 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.8□□□□□ -0.04
AP3S2P59780 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.8□□□□□ -0.04
AP3S2P59780 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S2P59780 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 MTHFR-217ENST00000641820 1569 ntBASIC14.8□□□□□ -0.04
AP3S2P59780 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
AP3S2P59780 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S2P59780 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S2P59780 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S2P59780 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.8□□□□□ -0.04
AP3S2P59780 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S2P59780 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms