Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.37■□□□□ 0.37
WNT3AP56704 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
WNT3AP56704 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.37■□□□□ 0.37
WNT3AP56704 AC025062.2-201ENST00000605477 670 ntBASIC17.37■□□□□ 0.37
WNT3AP56704 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
WNT3AP56704 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
WNT3AP56704 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
WNT3AP56704 AL590787.1-201ENST00000568856 1315 ntBASIC17.37■□□□□ 0.37
WNT3AP56704 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.37■□□□□ 0.37
WNT3AP56704 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
WNT3AP56704 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
WNT3AP56704 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
WNT3AP56704 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
WNT3AP56704 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.37■□□□□ 0.37
WNT3AP56704 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.37■□□□□ 0.37
WNT3AP56704 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.36■□□□□ 0.37
WNT3AP56704 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
WNT3AP56704 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.36■□□□□ 0.37
WNT3AP56704 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.36■□□□□ 0.37
WNT3AP56704 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
WNT3AP56704 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.36■□□□□ 0.37
WNT3AP56704 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.36■□□□□ 0.37
WNT3AP56704 AC139887.3-201ENST00000568585 713 ntBASIC17.36■□□□□ 0.37
WNT3AP56704 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.36■□□□□ 0.37
WNT3AP56704 AL139424.1-201ENST00000607572 797 ntBASIC17.36■□□□□ 0.37
WNT3AP56704 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.36■□□□□ 0.37
WNT3AP56704 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
WNT3AP56704 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.36■□□□□ 0.37
WNT3AP56704 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 AC009053.2-201ENST00000563701 2365 ntBASIC17.36■□□□□ 0.37
WNT3AP56704 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
WNT3AP56704 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.35■□□□□ 0.37
WNT3AP56704 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.35■□□□□ 0.37
WNT3AP56704 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.35■□□□□ 0.37
WNT3AP56704 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 AL450487.1-201ENST00000426799 995 ntBASIC17.35■□□□□ 0.37
WNT3AP56704 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.35■□□□□ 0.37
WNT3AP56704 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.35■□□□□ 0.37
WNT3AP56704 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.35■□□□□ 0.37
WNT3AP56704 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.35■□□□□ 0.37
WNT3AP56704 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
WNT3AP56704 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
WNT3AP56704 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
WNT3AP56704 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
WNT3AP56704 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
WNT3AP56704 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
WNT3AP56704 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
WNT3AP56704 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
WNT3AP56704 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
WNT3AP56704 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
WNT3AP56704 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
WNT3AP56704 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
WNT3AP56704 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
WNT3AP56704 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.34■□□□□ 0.37
WNT3AP56704 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.34■□□□□ 0.37
WNT3AP56704 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.34■□□□□ 0.37
WNT3AP56704 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
WNT3AP56704 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.34■□□□□ 0.37
WNT3AP56704 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
WNT3AP56704 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.34■□□□□ 0.37
WNT3AP56704 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.34■□□□□ 0.37
WNT3AP56704 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
WNT3AP56704 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms