Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
AP1S2P56377 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
AP1S2P56377 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.74■□□□□ 0.27
AP1S2P56377 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 OR6D1P-203ENST00000641209 4860 ntBASIC16.74■□□□□ 0.27
AP1S2P56377 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
AP1S2P56377 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
AP1S2P56377 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
AP1S2P56377 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
AP1S2P56377 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.74■□□□□ 0.27
AP1S2P56377 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.74■□□□□ 0.27
AP1S2P56377 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
AP1S2P56377 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.74■□□□□ 0.27
AP1S2P56377 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.74■□□□□ 0.27
AP1S2P56377 AL353135.1-201ENST00000606729 504 ntBASIC16.74■□□□□ 0.27
AP1S2P56377 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
AP1S2P56377 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.74■□□□□ 0.27
AP1S2P56377 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.74■□□□□ 0.27
AP1S2P56377 FRMD8P1-201ENST00000440433 1524 ntBASIC16.74■□□□□ 0.27
AP1S2P56377 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
AP1S2P56377 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
AP1S2P56377 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
AP1S2P56377 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.74■□□□□ 0.27
AP1S2P56377 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S2P56377 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 AC022211.2-201ENST00000585075 2527 ntBASIC16.73■□□□□ 0.27
AP1S2P56377 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.73■□□□□ 0.27
AP1S2P56377 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.73■□□□□ 0.27
AP1S2P56377 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.73■□□□□ 0.27
AP1S2P56377 AKR1C7P-201ENST00000305623 895 ntBASIC16.73■□□□□ 0.27
AP1S2P56377 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.73■□□□□ 0.27
AP1S2P56377 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.73■□□□□ 0.27
AP1S2P56377 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.73■□□□□ 0.27
AP1S2P56377 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.73■□□□□ 0.27
AP1S2P56377 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.73■□□□□ 0.27
AP1S2P56377 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.73■□□□□ 0.27
AP1S2P56377 IFNL4P1-201ENST00000607083 540 ntBASIC16.73■□□□□ 0.27
AP1S2P56377 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.73■□□□□ 0.27
AP1S2P56377 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
AP1S2P56377 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
AP1S2P56377 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
AP1S2P56377 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S2P56377 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S2P56377 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.72■□□□□ 0.27
AP1S2P56377 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
AP1S2P56377 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S2P56377 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S2P56377 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S2P56377 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S2P56377 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S2P56377 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
AP1S2P56377 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S2P56377 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
AP1S2P56377 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S2P56377 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
AP1S2P56377 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S2P56377 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S2P56377 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S2P56377 SART3-203ENST00000546611 1184 ntBASIC16.72■□□□□ 0.27
AP1S2P56377 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S2P56377 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.72■□□□□ 0.27
AP1S2P56377 AC012313.10-201ENST00000623509 926 ntBASIC16.72■□□□□ 0.27
AP1S2P56377 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
AP1S2P56377 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms