Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 HNRNPDP1-201ENST00000439535 754 ntBASIC18.73■□□□□ 0.59
CASP4P49662 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.73■□□□□ 0.59
CASP4P49662 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.73■□□□□ 0.59
CASP4P49662 FAM197Y8-203ENST00000450145 560 ntBASIC18.73■□□□□ 0.59
CASP4P49662 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.73■□□□□ 0.59
CASP4P49662 SCARNA2-201ENST00000458748 420 ntBASIC18.73■□□□□ 0.59
CASP4P49662 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.73■□□□□ 0.59
CASP4P49662 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.73■□□□□ 0.59
CASP4P49662 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.73■□□□□ 0.59
CASP4P49662 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.73■□□□□ 0.59
CASP4P49662 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CASP4P49662 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.73■□□□□ 0.59
CASP4P49662 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.73■□□□□ 0.59
CASP4P49662 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.73■□□□□ 0.59
CASP4P49662 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASP4P49662 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CASP4P49662 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.73■□□□□ 0.59
CASP4P49662 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.73■□□□□ 0.59
CASP4P49662 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CASP4P49662 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CASP4P49662 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASP4P49662 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CASP4P49662 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASP4P49662 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CASP4P49662 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CASP4P49662 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
CASP4P49662 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.73■□□□□ 0.59
CASP4P49662 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.73■□□□□ 0.59
CASP4P49662 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.73■□□□□ 0.59
CASP4P49662 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASP4P49662 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.73■□□□□ 0.59
CASP4P49662 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASP4P49662 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CASP4P49662 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.72■□□□□ 0.59
CASP4P49662 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CASP4P49662 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.72■□□□□ 0.59
CASP4P49662 RNPS1P1-201ENST00000507437 918 ntBASIC18.72■□□□□ 0.59
CASP4P49662 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
CASP4P49662 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.72■□□□□ 0.59
CASP4P49662 AL139424.1-201ENST00000607572 797 ntBASIC18.72■□□□□ 0.59
CASP4P49662 AL589182.2-201ENST00000619332 1049 ntBASIC18.72■□□□□ 0.59
CASP4P49662 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
CASP4P49662 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CASP4P49662 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.72■□□□□ 0.59
CASP4P49662 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.72■□□□□ 0.59
CASP4P49662 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASP4P49662 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASP4P49662 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.71■□□□□ 0.59
CASP4P49662 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CASP4P49662 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASP4P49662 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASP4P49662 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CASP4P49662 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASP4P49662 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASP4P49662 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.71■□□□□ 0.59
CASP4P49662 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.71■□□□□ 0.59
CASP4P49662 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.71■□□□□ 0.59
CASP4P49662 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CASP4P49662 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.71■□□□□ 0.59
CASP4P49662 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASP4P49662 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CASP4P49662 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.71■□□□□ 0.59
CASP4P49662 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CASP4P49662 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.71■□□□□ 0.59
CASP4P49662 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.71■□□□□ 0.59
CASP4P49662 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CASP4P49662 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CASP4P49662 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.71■□□□□ 0.59
CASP4P49662 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASP4P49662 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.71■□□□□ 0.59
CASP4P49662 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASP4P49662 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.71■□□□□ 0.59
CASP4P49662 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.71■□□□□ 0.59
CASP4P49662 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.71■□□□□ 0.59
CASP4P49662 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CASP4P49662 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASP4P49662 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASP4P49662 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.71■□□□□ 0.59
CASP4P49662 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CASP4P49662 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CASP4P49662 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CASP4P49662 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASP4P49662 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CASP4P49662 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms