Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CDC34P49427 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 AC092850.2-201ENST00000623821 2697 ntBASIC13.64□□□□□ -0.23
CDC34P49427 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CDC34P49427 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC34P49427 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.63□□□□□ -0.23
CDC34P49427 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC34P49427 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.63□□□□□ -0.23
CDC34P49427 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.63□□□□□ -0.23
CDC34P49427 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 SEC1P-202ENST00000473944 940 ntBASIC13.63□□□□□ -0.23
CDC34P49427 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC34P49427 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC34P49427 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CDC34P49427 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC34P49427 AL023803.3-201ENST00000615559 522 ntBASIC13.63□□□□□ -0.23
CDC34P49427 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CDC34P49427 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CDC34P49427 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC34P49427 AC105917.1-201ENST00000506637 2539 ntBASIC13.63□□□□□ -0.23
CDC34P49427 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CDC34P49427 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC34P49427 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CDC34P49427 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CDC34P49427 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC34P49427 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC34P49427 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC34P49427 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDC34P49427 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CDC34P49427 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.62□□□□□ -0.23
CDC34P49427 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDC34P49427 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC34P49427 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC34P49427 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC34P49427 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC34P49427 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDC34P49427 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CDC34P49427 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC34P49427 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.62□□□□□ -0.23
CDC34P49427 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC34P49427 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC34P49427 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC34P49427 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC34P49427 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
CDC34P49427 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC34P49427 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CDC34P49427 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC34P49427 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDC34P49427 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDC34P49427 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CDC34P49427 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDC34P49427 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDC34P49427 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.62□□□□□ -0.23
CDC34P49427 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDC34P49427 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.62□□□□□ -0.23
CDC34P49427 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDC34P49427 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.62□□□□□ -0.23
CDC34P49427 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC34P49427 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC34P49427 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC34P49427 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.62□□□□□ -0.23
CDC34P49427 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDC34P49427 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
CDC34P49427 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC34P49427 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDC34P49427 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC34P49427 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms