Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MMP13P45452 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.9■□□□□ 0.46
MMP13P45452 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
MMP13P45452 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MMP13P45452 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MMP13P45452 LINC02199-201ENST00000506655 2702 ntBASIC17.9■□□□□ 0.46
MMP13P45452 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MMP13P45452 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
MMP13P45452 AC116353.5-201ENST00000638148 1699 ntBASIC17.9■□□□□ 0.46
MMP13P45452 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.9■□□□□ 0.46
MMP13P45452 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MMP13P45452 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.9■□□□□ 0.46
MMP13P45452 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
MMP13P45452 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.89■□□□□ 0.46
MMP13P45452 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
MMP13P45452 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MMP13P45452 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
MMP13P45452 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.89■□□□□ 0.45
MMP13P45452 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MMP13P45452 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
MMP13P45452 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.89■□□□□ 0.45
MMP13P45452 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
MMP13P45452 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MMP13P45452 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MMP13P45452 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MMP13P45452 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.89■□□□□ 0.45
MMP13P45452 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MMP13P45452 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MMP13P45452 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
MMP13P45452 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.89■□□□□ 0.45
MMP13P45452 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.89■□□□□ 0.45
MMP13P45452 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.89■□□□□ 0.45
MMP13P45452 AC111152.3-201ENST00000569699 673 ntBASIC17.89■□□□□ 0.45
MMP13P45452 AL591684.3-201ENST00000605187 298 ntBASIC17.89■□□□□ 0.45
MMP13P45452 AL121772.3-201ENST00000610840 674 ntBASIC17.89■□□□□ 0.45
MMP13P45452 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.89■□□□□ 0.45
MMP13P45452 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.89■□□□□ 0.45
MMP13P45452 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.89■□□□□ 0.45
MMP13P45452 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MMP13P45452 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
MMP13P45452 AC005915.1-201ENST00000624912 2018 ntBASIC17.89■□□□□ 0.45
MMP13P45452 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MMP13P45452 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
MMP13P45452 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.89■□□□□ 0.45
MMP13P45452 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MMP13P45452 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.89■□□□□ 0.45
MMP13P45452 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MMP13P45452 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MMP13P45452 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
MMP13P45452 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP13P45452 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP13P45452 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP13P45452 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MMP13P45452 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP13P45452 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.88■□□□□ 0.45
MMP13P45452 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP13P45452 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.88■□□□□ 0.45
MMP13P45452 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
MMP13P45452 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
MMP13P45452 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP13P45452 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.88■□□□□ 0.45
MMP13P45452 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP13P45452 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.88■□□□□ 0.45
MMP13P45452 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP13P45452 MYCLP1-201ENST00000372451 1075 ntBASIC17.88■□□□□ 0.45
MMP13P45452 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
MMP13P45452 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.88■□□□□ 0.45
MMP13P45452 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.88■□□□□ 0.45
MMP13P45452 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
MMP13P45452 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
MMP13P45452 AC012313.10-201ENST00000623509 926 ntBASIC17.88■□□□□ 0.45
MMP13P45452 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MMP13P45452 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP13P45452 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MMP13P45452 KRT8P10-201ENST00000450021 1447 ntBASIC17.88■□□□□ 0.45
MMP13P45452 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MMP13P45452 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
MMP13P45452 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP13P45452 AC026691.1-201ENST00000602502 2017 ntBASIC17.88■□□□□ 0.45
MMP13P45452 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP13P45452 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.87■□□□□ 0.45
MMP13P45452 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
MMP13P45452 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.87■□□□□ 0.45
MMP13P45452 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.87■□□□□ 0.45
MMP13P45452 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP13P45452 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.87■□□□□ 0.45
MMP13P45452 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.87■□□□□ 0.45
MMP13P45452 KRT18P31-201ENST00000506277 1292 ntBASIC17.87■□□□□ 0.45
MMP13P45452 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms