Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.42■□□□□ 0.38
RPA3P35244 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.42■□□□□ 0.38
RPA3P35244 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RPA3P35244 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.42■□□□□ 0.38
RPA3P35244 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.42■□□□□ 0.38
RPA3P35244 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RPA3P35244 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RPA3P35244 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.42■□□□□ 0.38
RPA3P35244 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RPA3P35244 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.42■□□□□ 0.38
RPA3P35244 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.41■□□□□ 0.38
RPA3P35244 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.41■□□□□ 0.38
RPA3P35244 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 CROCCP1-201ENST00000426910 5675 ntBASIC17.41■□□□□ 0.38
RPA3P35244 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RPA3P35244 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.41■□□□□ 0.38
RPA3P35244 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.41■□□□□ 0.38
RPA3P35244 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RPA3P35244 IGHV3-41-201ENST00000613121 348 ntBASIC17.41■□□□□ 0.38
RPA3P35244 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.41■□□□□ 0.38
RPA3P35244 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.41■□□□□ 0.38
RPA3P35244 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.41■□□□□ 0.38
RPA3P35244 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.41■□□□□ 0.38
RPA3P35244 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.41■□□□□ 0.38
RPA3P35244 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
RPA3P35244 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPA3P35244 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.41■□□□□ 0.38
RPA3P35244 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RPA3P35244 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RPA3P35244 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
RPA3P35244 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
RPA3P35244 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.4■□□□□ 0.38
RPA3P35244 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.4■□□□□ 0.38
RPA3P35244 AC090616.6-201ENST00000582640 721 ntBASIC17.4■□□□□ 0.38
RPA3P35244 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.4■□□□□ 0.38
RPA3P35244 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.4■□□□□ 0.38
RPA3P35244 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.4■□□□□ 0.38
RPA3P35244 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.4■□□□□ 0.38
RPA3P35244 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 AC011270.2-201ENST00000624293 2550 ntBASIC17.4■□□□□ 0.38
RPA3P35244 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.4■□□□□ 0.38
RPA3P35244 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.4■□□□□ 0.38
RPA3P35244 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.4■□□□□ 0.38
RPA3P35244 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.4■□□□□ 0.38
RPA3P35244 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPA3P35244 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RPA3P35244 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RPA3P35244 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.39■□□□□ 0.38
RPA3P35244 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RPA3P35244 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.39■□□□□ 0.38
RPA3P35244 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RPA3P35244 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPA3P35244 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.39■□□□□ 0.37
RPA3P35244 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
RPA3P35244 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms