Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NF1P21359 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.8□□□□□ -0.2
NF1P21359 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.8□□□□□ -0.2
NF1P21359 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.8□□□□□ -0.2
NF1P21359 STK25P1-201ENST00000585406 838 ntBASIC13.8□□□□□ -0.2
NF1P21359 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NF1P21359 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NF1P21359 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
NF1P21359 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NF1P21359 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NF1P21359 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
NF1P21359 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.79□□□□□ -0.2
NF1P21359 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 SPDYE19P-201ENST00000338590 713 ntBASIC13.79□□□□□ -0.2
NF1P21359 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.79□□□□□ -0.2
NF1P21359 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.79□□□□□ -0.2
NF1P21359 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.79□□□□□ -0.2
NF1P21359 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.79□□□□□ -0.2
NF1P21359 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.79□□□□□ -0.2
NF1P21359 AC004840.1-201ENST00000636359 365 ntBASIC13.79□□□□□ -0.2
NF1P21359 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.79□□□□□ -0.2
NF1P21359 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.79□□□□□ -0.2
NF1P21359 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.79□□□□□ -0.2
NF1P21359 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.79□□□□□ -0.2
NF1P21359 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NF1P21359 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NF1P21359 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.79□□□□□ -0.2
NF1P21359 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.79□□□□□ -0.2
NF1P21359 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.79□□□□□ -0.2
NF1P21359 MYCLP2-201ENST00000449268 967 ntBASIC13.79□□□□□ -0.2
NF1P21359 AL513480.1-201ENST00000451731 511 ntBASIC13.79□□□□□ -0.2
NF1P21359 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.79□□□□□ -0.2
NF1P21359 ELK1P1-201ENST00000485699 580 ntBASIC13.79□□□□□ -0.2
NF1P21359 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.79□□□□□ -0.2
NF1P21359 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.79□□□□□ -0.2
NF1P21359 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.79□□□□□ -0.2
NF1P21359 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.79□□□□□ -0.2
NF1P21359 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.79□□□□□ -0.2
NF1P21359 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
NF1P21359 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NF1P21359 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NF1P21359 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.79□□□□□ -0.2
NF1P21359 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NF1P21359 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NF1P21359 HINT2P1-201ENST00000419438 481 ntBASIC13.78□□□□□ -0.2
NF1P21359 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NF1P21359 TMEM198B-204ENST00000484016 896 ntBASIC13.78□□□□□ -0.2
NF1P21359 AL645728.2-201ENST00000641974 660 ntBASIC13.78□□□□□ -0.2
NF1P21359 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.78□□□□□ -0.2
NF1P21359 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NF1P21359 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.78□□□□□ -0.2
NF1P21359 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NF1P21359 CROCCP3-202ENST00000420820 1947 ntBASIC13.78□□□□□ -0.2
NF1P21359 REXO1L11P-201ENST00000620964 1927 ntBASIC13.78□□□□□ -0.2
NF1P21359 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NF1P21359 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.78□□□□□ -0.2
NF1P21359 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.78□□□□□ -0.2
NF1P21359 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NF1P21359 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
NF1P21359 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NF1P21359 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NF1P21359 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.78□□□□□ -0.2
NF1P21359 COX5BP2-201ENST00000392354 334 ntBASIC13.78□□□□□ -0.2
NF1P21359 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NF1P21359 ZNF890P-202ENST00000530367 1156 ntBASIC13.78□□□□□ -0.2
NF1P21359 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.78□□□□□ -0.2
NF1P21359 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.78□□□□□ -0.2
NF1P21359 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NF1P21359 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.78□□□□□ -0.2
NF1P21359 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.78□□□□□ -0.2
NF1P21359 AC087499.5-201ENST00000452760 1342 ntBASIC13.78□□□□□ -0.2
NF1P21359 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.78□□□□□ -0.2
NF1P21359 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NF1P21359 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NF1P21359 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.77□□□□□ -0.2
NF1P21359 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms