Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RAB3BP20337 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB3BP20337 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RAB3BP20337 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RAB3BP20337 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RAB3BP20337 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RAB3BP20337 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 MYCLP1-201ENST00000372451 1075 ntBASIC15.11■□□□□ 0.01
RAB3BP20337 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RAB3BP20337 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.11■□□□□ 0.01
RAB3BP20337 FITM1-202ENST00000559294 800 ntBASIC15.11■□□□□ 0.01
RAB3BP20337 AL512604.3-201ENST00000569583 964 ntBASIC15.11■□□□□ 0.01
RAB3BP20337 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.11■□□□□ 0.01
RAB3BP20337 AC233702.5-201ENST00000584107 538 ntBASIC15.11■□□□□ 0.01
RAB3BP20337 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB3BP20337 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB3BP20337 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB3BP20337 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB3BP20337 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB3BP20337 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB3BP20337 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB3BP20337 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB3BP20337 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB3BP20337 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB3BP20337 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB3BP20337 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 ID1-201ENST00000376105 1233 ntBASIC15.1■□□□□ 0.01
RAB3BP20337 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 MIR935-201ENST00000401179 91 ntBASIC15.1■□□□□ 0.01
RAB3BP20337 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB3BP20337 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB3BP20337 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB3BP20337 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB3BP20337 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
RAB3BP20337 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB3BP20337 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB3BP20337 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RAB3BP20337 AC092364.2-201ENST00000596710 2692 ntBASIC15.1■□□□□ 0.01
RAB3BP20337 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3BP20337 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3BP20337 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3BP20337 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RAB3BP20337 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3BP20337 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RAB3BP20337 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB3BP20337 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3BP20337 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3BP20337 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RAB3BP20337 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB3BP20337 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RAB3BP20337 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB3BP20337 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
RAB3BP20337 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RAB3BP20337 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RAB3BP20337 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB3BP20337 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB3BP20337 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RAB3BP20337 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3BP20337 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3BP20337 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB3BP20337 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.09■□□□□ 0.01
RAB3BP20337 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms