Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.15□□□□□ -0.14
SCAF4O95104 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SCAF4O95104 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SCAF4O95104 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SCAF4O95104 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SCAF4O95104 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.15□□□□□ -0.14
SCAF4O95104 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.15□□□□□ -0.14
SCAF4O95104 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 AC113404.2-201ENST00000507884 177 ntBASIC14.15□□□□□ -0.14
SCAF4O95104 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.15□□□□□ -0.14
SCAF4O95104 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.15□□□□□ -0.14
SCAF4O95104 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.15□□□□□ -0.14
SCAF4O95104 AC010203.1-204ENST00000548782 407 ntBASIC14.15□□□□□ -0.14
SCAF4O95104 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.15□□□□□ -0.14
SCAF4O95104 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.15□□□□□ -0.14
SCAF4O95104 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.15□□□□□ -0.14
SCAF4O95104 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
SCAF4O95104 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.15□□□□□ -0.14
SCAF4O95104 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SCAF4O95104 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.15□□□□□ -0.14
SCAF4O95104 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SCAF4O95104 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
SCAF4O95104 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCAF4O95104 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.15□□□□□ -0.14
SCAF4O95104 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
SCAF4O95104 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.14□□□□□ -0.15
SCAF4O95104 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SCAF4O95104 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.14□□□□□ -0.15
SCAF4O95104 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SCAF4O95104 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SCAF4O95104 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SCAF4O95104 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SCAF4O95104 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 TERF1P1-201ENST00000311003 1181 ntBASIC14.14□□□□□ -0.15
SCAF4O95104 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.14□□□□□ -0.15
SCAF4O95104 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 AC005104.2-201ENST00000427818 678 ntBASIC14.14□□□□□ -0.15
SCAF4O95104 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.14□□□□□ -0.15
SCAF4O95104 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.14□□□□□ -0.15
SCAF4O95104 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.14□□□□□ -0.15
SCAF4O95104 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.14□□□□□ -0.15
SCAF4O95104 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.14□□□□□ -0.15
SCAF4O95104 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SCAF4O95104 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.14□□□□□ -0.15
SCAF4O95104 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SCAF4O95104 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.14□□□□□ -0.15
SCAF4O95104 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SCAF4O95104 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.14□□□□□ -0.15
SCAF4O95104 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.14□□□□□ -0.15
SCAF4O95104 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.14□□□□□ -0.15
SCAF4O95104 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SCAF4O95104 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
SCAF4O95104 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCAF4O95104 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SCAF4O95104 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCAF4O95104 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.13□□□□□ -0.15
SCAF4O95104 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCAF4O95104 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCAF4O95104 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms