Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LTN1O94822 AC016396.2-201ENST00000562575 1417 ntBASIC22.49■■□□□ 1.19
LTN1O94822 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
LTN1O94822 BOC-212ENST00000485230 2173 ntTSL 2 BASIC22.49■■□□□ 1.19
LTN1O94822 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC22.49■■□□□ 1.19
LTN1O94822 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
LTN1O94822 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
LTN1O94822 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
LTN1O94822 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
LTN1O94822 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LTN1O94822 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LTN1O94822 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LTN1O94822 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC22.49■■□□□ 1.19
LTN1O94822 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC22.49■■□□□ 1.19
LTN1O94822 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LTN1O94822 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC22.49■■□□□ 1.19
LTN1O94822 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC22.49■■□□□ 1.19
LTN1O94822 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC22.49■■□□□ 1.19
LTN1O94822 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC22.49■■□□□ 1.19
LTN1O94822 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC22.49■■□□□ 1.19
LTN1O94822 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LTN1O94822 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC22.49■■□□□ 1.19
LTN1O94822 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC22.49■■□□□ 1.19
LTN1O94822 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.49■■□□□ 1.19
LTN1O94822 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LTN1O94822 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LTN1O94822 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.49■■□□□ 1.19
LTN1O94822 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC22.48■■□□□ 1.19
LTN1O94822 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LTN1O94822 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LTN1O94822 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
LTN1O94822 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC22.48■■□□□ 1.19
LTN1O94822 RAC2-204ENST00000406508 893 ntTSL 5 BASIC22.48■■□□□ 1.19
LTN1O94822 AC241585.1-201ENST00000433527 519 ntBASIC22.48■■□□□ 1.19
LTN1O94822 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC22.48■■□□□ 1.19
LTN1O94822 TERF1P3-201ENST00000505638 1227 ntBASIC22.48■■□□□ 1.19
LTN1O94822 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC22.48■■□□□ 1.19
LTN1O94822 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
LTN1O94822 AC007967.4-201ENST00000614700 386 ntBASIC22.48■■□□□ 1.19
LTN1O94822 AC073592.8-201ENST00000624126 511 ntBASIC22.48■■□□□ 1.19
LTN1O94822 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LTN1O94822 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LTN1O94822 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC22.48■■□□□ 1.19
LTN1O94822 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
LTN1O94822 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC22.48■■□□□ 1.19
LTN1O94822 TAF8-206ENST00000472818 719 ntTSL 2 BASIC22.48■■□□□ 1.19
LTN1O94822 COQ9-214ENST00000567933 882 ntTSL 3 BASIC22.48■■□□□ 1.19
LTN1O94822 AC073389.1-201ENST00000595595 795 ntBASIC22.48■■□□□ 1.19
LTN1O94822 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LTN1O94822 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC22.48■■□□□ 1.19
LTN1O94822 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.48■■□□□ 1.19
LTN1O94822 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
LTN1O94822 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LTN1O94822 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC22.47■■□□□ 1.19
LTN1O94822 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LTN1O94822 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC22.47■■□□□ 1.19
LTN1O94822 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC22.47■■□□□ 1.19
LTN1O94822 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LTN1O94822 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC22.47■■□□□ 1.19
LTN1O94822 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LTN1O94822 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC22.47■■□□□ 1.19
LTN1O94822 TMPRSS11CP-201ENST00000453277 683 ntBASIC22.47■■□□□ 1.19
LTN1O94822 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LTN1O94822 SERBP1P5-201ENST00000510079 1181 ntBASIC22.47■■□□□ 1.19
LTN1O94822 AL138918.1-201ENST00000568306 659 ntBASIC22.47■■□□□ 1.19
LTN1O94822 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC22.47■■□□□ 1.19
LTN1O94822 AL138828.2-201ENST00000615812 383 ntBASIC22.47■■□□□ 1.19
LTN1O94822 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
LTN1O94822 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LTN1O94822 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LTN1O94822 AL021920.2-201ENST00000624828 1351 ntBASIC22.47■■□□□ 1.19
LTN1O94822 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
LTN1O94822 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LTN1O94822 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LTN1O94822 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LTN1O94822 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LTN1O94822 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.46■■□□□ 1.19
LTN1O94822 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LTN1O94822 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC22.46■■□□□ 1.19
LTN1O94822 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LTN1O94822 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
LTN1O94822 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.46■■□□□ 1.19
LTN1O94822 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LTN1O94822 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.46■■□□□ 1.19
LTN1O94822 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LTN1O94822 FAM220BP-201ENST00000377689 816 ntBASIC22.46■■□□□ 1.19
LTN1O94822 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC22.46■■□□□ 1.19
LTN1O94822 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LTN1O94822 AL590560.3-201ENST00000623350 461 ntBASIC22.46■■□□□ 1.19
LTN1O94822 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LTN1O94822 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC22.46■■□□□ 1.19
LTN1O94822 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LTN1O94822 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
LTN1O94822 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC22.46■■□□□ 1.19
LTN1O94822 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
LTN1O94822 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
LTN1O94822 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
LTN1O94822 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
LTN1O94822 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
LTN1O94822 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC22.45■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms