Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AC106820.2-201ENST00000563775 3264 ntBASIC17.4■□□□□ 0.38
PRAMEF11O60813 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 AC060834.1-201ENST00000443027 2032 ntBASIC17.4■□□□□ 0.38
PRAMEF11O60813 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PRAMEF11O60813 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
PRAMEF11O60813 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.39■□□□□ 0.38
PRAMEF11O60813 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
PRAMEF11O60813 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.38
PRAMEF11O60813 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PRAMEF11O60813 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.39■□□□□ 0.37
PRAMEF11O60813 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.39■□□□□ 0.37
PRAMEF11O60813 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.39■□□□□ 0.37
PRAMEF11O60813 RPL13AP23-201ENST00000480739 586 ntBASIC17.39■□□□□ 0.37
PRAMEF11O60813 SLC25A6P2-201ENST00000497974 877 ntBASIC17.39■□□□□ 0.37
PRAMEF11O60813 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.39■□□□□ 0.37
PRAMEF11O60813 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.39■□□□□ 0.37
PRAMEF11O60813 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.39■□□□□ 0.37
PRAMEF11O60813 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.39■□□□□ 0.37
PRAMEF11O60813 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
PRAMEF11O60813 AC004790.2-201ENST00000623588 572 ntBASIC17.39■□□□□ 0.37
PRAMEF11O60813 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PRAMEF11O60813 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PRAMEF11O60813 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.39■□□□□ 0.37
PRAMEF11O60813 AC002310.6-201ENST00000624451 1377 ntBASIC17.39■□□□□ 0.37
PRAMEF11O60813 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF11O60813 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.39■□□□□ 0.37
PRAMEF11O60813 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF11O60813 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF11O60813 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF11O60813 MRPL20P1-201ENST00000400819 433 ntBASIC17.38■□□□□ 0.37
PRAMEF11O60813 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 PRSS29P-201ENST00000440800 595 ntBASIC17.38■□□□□ 0.37
PRAMEF11O60813 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF11O60813 SLC25A1P1-201ENST00000528351 927 ntBASIC17.38■□□□□ 0.37
PRAMEF11O60813 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF11O60813 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF11O60813 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF11O60813 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF11O60813 AC104109.2-201ENST00000602919 1418 ntBASIC17.38■□□□□ 0.37
PRAMEF11O60813 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEF11O60813 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEF11O60813 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
PRAMEF11O60813 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF11O60813 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PRAMEF11O60813 AC034105.1-201ENST00000563488 319 ntBASIC17.37■□□□□ 0.37
PRAMEF11O60813 OR7E47P-204ENST00000575924 449 ntBASIC17.37■□□□□ 0.37
PRAMEF11O60813 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.37■□□□□ 0.37
PRAMEF11O60813 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEF11O60813 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.37■□□□□ 0.37
PRAMEF11O60813 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.37■□□□□ 0.37
PRAMEF11O60813 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.37■□□□□ 0.37
PRAMEF11O60813 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms