Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
XRCC2O43543 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.98□□□□□ -0.01
XRCC2O43543 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.98□□□□□ -0.01
XRCC2O43543 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.98□□□□□ -0.01
XRCC2O43543 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.98□□□□□ -0.01
XRCC2O43543 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.98□□□□□ -0.01
XRCC2O43543 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.98□□□□□ -0.01
XRCC2O43543 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XRCC2O43543 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
XRCC2O43543 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.98□□□□□ -0.01
XRCC2O43543 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.98□□□□□ -0.01
XRCC2O43543 AP000867.4-201ENST00000641616 219 ntBASIC14.98□□□□□ -0.01
XRCC2O43543 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
XRCC2O43543 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XRCC2O43543 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
XRCC2O43543 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.98□□□□□ -0.01
XRCC2O43543 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
XRCC2O43543 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XRCC2O43543 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.98□□□□□ -0.01
XRCC2O43543 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.98□□□□□ -0.01
XRCC2O43543 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
XRCC2O43543 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XRCC2O43543 EGFEM1P-202ENST00000431685 1563 ntBASIC14.98□□□□□ -0.01
XRCC2O43543 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
XRCC2O43543 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
XRCC2O43543 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
XRCC2O43543 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
XRCC2O43543 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
XRCC2O43543 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
XRCC2O43543 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.97□□□□□ -0.01
XRCC2O43543 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
XRCC2O43543 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
XRCC2O43543 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
XRCC2O43543 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 UPK3BP1-201ENST00000428678 509 ntBASIC14.97□□□□□ -0.01
XRCC2O43543 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.97□□□□□ -0.01
XRCC2O43543 ABCD1P5-201ENST00000445663 754 ntBASIC14.97□□□□□ -0.01
XRCC2O43543 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.97□□□□□ -0.01
XRCC2O43543 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 AC124947.2-201ENST00000547118 1133 ntBASIC14.97□□□□□ -0.01
XRCC2O43543 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.97□□□□□ -0.01
XRCC2O43543 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.97□□□□□ -0.01
XRCC2O43543 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.97□□□□□ -0.01
XRCC2O43543 MIR5100-201ENST00000579544 119 ntBASIC14.97□□□□□ -0.01
XRCC2O43543 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
XRCC2O43543 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 AL591684.3-201ENST00000605187 298 ntBASIC14.97□□□□□ -0.01
XRCC2O43543 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.97□□□□□ -0.01
XRCC2O43543 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
XRCC2O43543 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.97□□□□□ -0.01
XRCC2O43543 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
XRCC2O43543 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
XRCC2O43543 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
XRCC2O43543 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.97□□□□□ -0.01
XRCC2O43543 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
XRCC2O43543 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.97□□□□□ -0.01
XRCC2O43543 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
XRCC2O43543 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
XRCC2O43543 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.96□□□□□ -0.01
XRCC2O43543 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
XRCC2O43543 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
XRCC2O43543 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.96□□□□□ -0.01
XRCC2O43543 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
XRCC2O43543 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
XRCC2O43543 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
XRCC2O43543 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
XRCC2O43543 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
XRCC2O43543 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
XRCC2O43543 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.96□□□□□ -0.01
XRCC2O43543 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
XRCC2O43543 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
XRCC2O43543 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.96□□□□□ -0.01
XRCC2O43543 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
XRCC2O43543 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms