Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 KRT18P22-201ENST00000402024 1347 ntBASIC18.71■□□□□ 0.59
CCDC66A2RUB6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.58
CCDC66A2RUB6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
CCDC66A2RUB6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCDC66A2RUB6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 REXO1L11P-201ENST00000620964 1927 ntBASIC18.7■□□□□ 0.58
CCDC66A2RUB6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.7■□□□□ 0.58
CCDC66A2RUB6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC66A2RUB6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 GCSHP2-201ENST00000560971 527 ntBASIC18.69■□□□□ 0.58
CCDC66A2RUB6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC66A2RUB6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 LYSMD4-203ENST00000378904 2122 ntBASIC18.68■□□□□ 0.58
CCDC66A2RUB6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms