Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 KRT18P48-201ENST00000434763 852 ntBASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 MIR4651-201ENST00000582622 73 ntBASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 AC079602.3-201ENST00000623931 403 ntBASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 TUBB8P12-201ENST00000308911 1335 ntBASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 TUBB7P-202ENST00000428444 1305 ntBASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 TUBB8P7-204ENST00000567960 1332 ntBASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRBV3S1A0A5B6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV3S1A0A5B6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 AP000523.1-201ENST00000398242 1049 ntBASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 AL136038.4-201ENST00000603606 1261 ntBASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 CROCCP1-201ENST00000426910 5675 ntBASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV3S1A0A5B6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCRBV3S1A0A5B6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TCRBV3S1A0A5B6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCRBV3S1A0A5B6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.08■□□□□ 0.17
TCRBV3S1A0A5B6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCRBV3S1A0A5B6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCRBV3S1A0A5B6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.08■□□□□ 0.17
TCRBV3S1A0A5B6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TCRBV3S1A0A5B6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.08■□□□□ 0.17
TCRBV3S1A0A5B6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCRBV3S1A0A5B6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms