Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
EBF1Q9UH73 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
EBF1Q9UH73 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
EBF1Q9UH73 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
EBF1Q9UH73 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
EBF1Q9UH73 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.53■□□□□ 0.4
EBF1Q9UH73 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.53■□□□□ 0.4
EBF1Q9UH73 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
EBF1Q9UH73 STK19B-204ENST00000512515 211 ntBASIC17.53■□□□□ 0.4
EBF1Q9UH73 OR7E47P-204ENST00000575924 449 ntBASIC17.53■□□□□ 0.4
EBF1Q9UH73 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.53■□□□□ 0.4
EBF1Q9UH73 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.53■□□□□ 0.4
EBF1Q9UH73 AC116407.2-201ENST00000613639 860 ntBASIC17.53■□□□□ 0.4
EBF1Q9UH73 AC007064.4-201ENST00000637740 555 ntBASIC17.53■□□□□ 0.4
EBF1Q9UH73 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.53■□□□□ 0.4
EBF1Q9UH73 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.53■□□□□ 0.4
EBF1Q9UH73 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
EBF1Q9UH73 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.53■□□□□ 0.4
EBF1Q9UH73 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
EBF1Q9UH73 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 AC141586.5-201ENST00000624546 2050 ntBASIC17.52■□□□□ 0.4
EBF1Q9UH73 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
EBF1Q9UH73 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.52■□□□□ 0.4
EBF1Q9UH73 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.52■□□□□ 0.4
EBF1Q9UH73 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.52■□□□□ 0.4
EBF1Q9UH73 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.52■□□□□ 0.4
EBF1Q9UH73 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.52■□□□□ 0.4
EBF1Q9UH73 AL353135.1-201ENST00000606729 504 ntBASIC17.52■□□□□ 0.4
EBF1Q9UH73 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
EBF1Q9UH73 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.52■□□□□ 0.4
EBF1Q9UH73 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.52■□□□□ 0.4
EBF1Q9UH73 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.52■□□□□ 0.4
EBF1Q9UH73 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EBF1Q9UH73 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
EBF1Q9UH73 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
EBF1Q9UH73 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
EBF1Q9UH73 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
EBF1Q9UH73 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
EBF1Q9UH73 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
EBF1Q9UH73 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
EBF1Q9UH73 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
EBF1Q9UH73 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.52■□□□□ 0.39
EBF1Q9UH73 BX276092.7-203ENST00000637198 1536 ntBASIC17.52■□□□□ 0.39
EBF1Q9UH73 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
EBF1Q9UH73 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 AC097637.2-201ENST00000624096 1997 ntBASIC17.51■□□□□ 0.39
EBF1Q9UH73 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EBF1Q9UH73 AC080080.1-201ENST00000625121 2420 ntBASIC17.51■□□□□ 0.39
EBF1Q9UH73 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EBF1Q9UH73 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
EBF1Q9UH73 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EBF1Q9UH73 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EBF1Q9UH73 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
EBF1Q9UH73 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
EBF1Q9UH73 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 IGHV3-52-201ENST00000519770 353 ntBASIC17.51■□□□□ 0.39
EBF1Q9UH73 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 AC011467.4-201ENST00000594891 528 ntBASIC17.51■□□□□ 0.39
EBF1Q9UH73 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms