Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.81■□□□□ 0.12
LRFN1Q9P244 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
LRFN1Q9P244 CROCCP1-201ENST00000426910 5675 ntBASIC15.81■□□□□ 0.12
LRFN1Q9P244 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRFN1Q9P244 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN1Q9P244 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
LRFN1Q9P244 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN1Q9P244 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN1Q9P244 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN1Q9P244 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN1Q9P244 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN1Q9P244 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN1Q9P244 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN1Q9P244 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN1Q9P244 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN1Q9P244 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN1Q9P244 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 AL691403.2-201ENST00000618460 490 ntBASIC15.8■□□□□ 0.12
LRFN1Q9P244 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN1Q9P244 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN1Q9P244 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
LRFN1Q9P244 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN1Q9P244 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN1Q9P244 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRFN1Q9P244 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRFN1Q9P244 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRFN1Q9P244 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRFN1Q9P244 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRFN1Q9P244 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRFN1Q9P244 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRFN1Q9P244 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRFN1Q9P244 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRFN1Q9P244 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRFN1Q9P244 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 AC055717.3-201ENST00000622967 595 ntBASIC15.79■□□□□ 0.12
LRFN1Q9P244 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRFN1Q9P244 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRFN1Q9P244 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRFN1Q9P244 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRFN1Q9P244 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRFN1Q9P244 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.79■□□□□ 0.12
LRFN1Q9P244 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.78■□□□□ 0.12
LRFN1Q9P244 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRFN1Q9P244 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRFN1Q9P244 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRFN1Q9P244 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRFN1Q9P244 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.78■□□□□ 0.12
LRFN1Q9P244 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.78■□□□□ 0.12
LRFN1Q9P244 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRFN1Q9P244 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRFN1Q9P244 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRFN1Q9P244 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRFN1Q9P244 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRFN1Q9P244 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.78■□□□□ 0.12
LRFN1Q9P244 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.78■□□□□ 0.12
LRFN1Q9P244 MCCD1P2-201ENST00000423228 335 ntBASIC15.78■□□□□ 0.12
LRFN1Q9P244 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.78■□□□□ 0.12
LRFN1Q9P244 AC096734.2-201ENST00000562054 433 ntBASIC15.78■□□□□ 0.12
LRFN1Q9P244 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.78■□□□□ 0.12
LRFN1Q9P244 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.78■□□□□ 0.12
LRFN1Q9P244 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.78■□□□□ 0.12
LRFN1Q9P244 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.78■□□□□ 0.12
LRFN1Q9P244 AC092865.6-201ENST00000642101 219 ntBASIC15.78■□□□□ 0.12
LRFN1Q9P244 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.78■□□□□ 0.12
LRFN1Q9P244 AC133963.1-201ENST00000504166 1679 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms