Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD1Q9NXG2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD1Q9NXG2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.23■□□□□ 0.19
THUMPD1Q9NXG2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD1Q9NXG2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.23■□□□□ 0.19
THUMPD1Q9NXG2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
THUMPD1Q9NXG2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD1Q9NXG2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
THUMPD1Q9NXG2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 AL139384.1-201ENST00000612143 3047 ntBASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 AC046158.3-201ENST00000624947 2558 ntBASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 AL603756.1-201ENST00000606511 2163 ntBASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 SLC25A1P3-201ENST00000395415 828 ntBASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 AL121956.5-201ENST00000625261 221 ntBASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
THUMPD1Q9NXG2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 AC003669.1-201ENST00000334569 611 ntBASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 AL121672.3-201ENST00000608644 468 ntBASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD1Q9NXG2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
THUMPD1Q9NXG2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
THUMPD1Q9NXG2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THUMPD1Q9NXG2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THUMPD1Q9NXG2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THUMPD1Q9NXG2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THUMPD1Q9NXG2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
THUMPD1Q9NXG2 KRT8P10-201ENST00000450021 1447 ntBASIC16.2■□□□□ 0.18
THUMPD1Q9NXG2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THUMPD1Q9NXG2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THUMPD1Q9NXG2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THUMPD1Q9NXG2 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.2■□□□□ 0.18
THUMPD1Q9NXG2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THUMPD1Q9NXG2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THUMPD1Q9NXG2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms