Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 RCC2P3-201ENST00000418112 1537 ntBASIC20.4■□□□□ 0.86
RTN4Q9NQC3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 RN7SL471P-201ENST00000580476 299 ntBASIC20.4■□□□□ 0.86
RTN4Q9NQC3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RTN4Q9NQC3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RTN4Q9NQC3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RTN4Q9NQC3 AL359258.3-201ENST00000622910 2331 ntBASIC20.39■□□□□ 0.86
RTN4Q9NQC3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RTN4Q9NQC3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RTN4Q9NQC3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RTN4Q9NQC3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RTN4Q9NQC3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
RTN4Q9NQC3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC20.39■□□□□ 0.86
RTN4Q9NQC3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.39■□□□□ 0.86
RTN4Q9NQC3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 PID1-202ENST00000392054 2745 ntTSL 2 BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 AC004951.3-201ENST00000418645 1148 ntBASIC20.39■□□□□ 0.85
RTN4Q9NQC3 AC008040.2-201ENST00000461049 708 ntBASIC20.39■□□□□ 0.85
RTN4Q9NQC3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 ZNF93-205ENST00000591366 590 ntTSL 3 BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTN4Q9NQC3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 AC092364.2-201ENST00000596710 2692 ntBASIC20.38■□□□□ 0.85
RTN4Q9NQC3 HTR7P1-201ENST00000538670 1336 ntBASIC20.38■□□□□ 0.85
RTN4Q9NQC3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 PRAL-201ENST00000624952 3286 ntBASIC20.38■□□□□ 0.85
RTN4Q9NQC3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms