Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 LINC01711-201ENST00000598340 967 ntBASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 AL121772.3-201ENST00000610840 674 ntBASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 OR6D1P-203ENST00000641209 4860 ntBASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 AC022188.1-201ENST00000620960 1664 ntBASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 AC023824.1-201ENST00000562945 2975 ntBASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 AC246785.2-201ENST00000432512 513 ntBASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 KRT17P6-201ENST00000453795 1220 ntBASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 HYMAI-201ENST00000635591 3347 ntBASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMMDC1Q9NPL8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 AL603756.1-201ENST00000606511 2163 ntBASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 GMCL1P1-201ENST00000463439 1581 ntBASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMMDC1Q9NPL8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms