Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf49Q9H6J7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf49Q9H6J7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf49Q9H6J7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf49Q9H6J7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 DFFBP1-201ENST00000433250 979 ntBASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 AL844908.2-201ENST00000609461 460 ntBASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 AC004840.1-201ENST00000636359 365 ntBASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 AP000997.3-201ENST00000623333 2250 ntBASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 AL035456.1-201ENST00000456064 1369 ntBASIC18.67■□□□□ 0.58
C11orf49Q9H6J7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 AC087499.6-201ENST00000411576 835 ntBASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf49Q9H6J7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 AC135776.1-201ENST00000319817 2481 ntBASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 GNAQP1-201ENST00000444815 1067 ntBASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 AC022210.1-201ENST00000449856 793 ntBASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms