Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AC005521.1-201ENST00000393351 872 ntBASIC16.5■□□□□ 0.23
PIF1Q9H611 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PIF1Q9H611 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
PIF1Q9H611 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.5■□□□□ 0.23
PIF1Q9H611 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PIF1Q9H611 AC010203.1-204ENST00000548782 407 ntBASIC16.5■□□□□ 0.23
PIF1Q9H611 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.5■□□□□ 0.23
PIF1Q9H611 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PIF1Q9H611 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.5■□□□□ 0.23
PIF1Q9H611 AC140113.3-201ENST00000605663 199 ntBASIC16.5■□□□□ 0.23
PIF1Q9H611 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
PIF1Q9H611 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PIF1Q9H611 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.5■□□□□ 0.23
PIF1Q9H611 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PIF1Q9H611 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PIF1Q9H611 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.5■□□□□ 0.23
PIF1Q9H611 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PIF1Q9H611 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PIF1Q9H611 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.5■□□□□ 0.23
PIF1Q9H611 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PIF1Q9H611 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PIF1Q9H611 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PIF1Q9H611 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.5■□□□□ 0.23
PIF1Q9H611 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PIF1Q9H611 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PIF1Q9H611 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PIF1Q9H611 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PIF1Q9H611 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PIF1Q9H611 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.5■□□□□ 0.23
PIF1Q9H611 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
PIF1Q9H611 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PIF1Q9H611 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PIF1Q9H611 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.49■□□□□ 0.23
PIF1Q9H611 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.49■□□□□ 0.23
PIF1Q9H611 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.49■□□□□ 0.23
PIF1Q9H611 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PIF1Q9H611 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.49■□□□□ 0.23
PIF1Q9H611 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PIF1Q9H611 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.49■□□□□ 0.23
PIF1Q9H611 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
PIF1Q9H611 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.49■□□□□ 0.23
PIF1Q9H611 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PIF1Q9H611 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.49■□□□□ 0.23
PIF1Q9H611 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PIF1Q9H611 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PIF1Q9H611 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.49■□□□□ 0.23
PIF1Q9H611 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
PIF1Q9H611 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
PIF1Q9H611 AC078925.2-201ENST00000624013 1973 ntBASIC16.49■□□□□ 0.23
PIF1Q9H611 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.49■□□□□ 0.23
PIF1Q9H611 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.49■□□□□ 0.23
PIF1Q9H611 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.49■□□□□ 0.23
PIF1Q9H611 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PIF1Q9H611 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PIF1Q9H611 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.49■□□□□ 0.23
PIF1Q9H611 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.49■□□□□ 0.23
PIF1Q9H611 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PIF1Q9H611 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
PIF1Q9H611 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.48■□□□□ 0.23
PIF1Q9H611 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.48■□□□□ 0.23
PIF1Q9H611 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.48■□□□□ 0.23
PIF1Q9H611 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.48■□□□□ 0.23
PIF1Q9H611 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PIF1Q9H611 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.48■□□□□ 0.23
PIF1Q9H611 AC132872.4-202ENST00000622924 2756 ntBASIC16.48■□□□□ 0.23
PIF1Q9H611 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms