Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 AC124947.2-201ENST00000547118 1133 ntBASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 AC092053.1-201ENST00000605787 1936 ntBASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
COMMD4Q9H0A8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 SPDYE15P-201ENST00000424157 909 ntBASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
COMMD4Q9H0A8 DOC2GP-204ENST00000639052 2548 ntBASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 SLC25A1P3-201ENST00000395415 828 ntBASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 AL359075.1-203ENST00000462729 1002 ntBASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 AL441883.1-201ENST00000566170 1045 ntBASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
COMMD4Q9H0A8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms