Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 AC004877.2-201ENST00000623941 599 ntBASIC19.99■□□□□ 0.79
SLF1Q9BQI6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLF1Q9BQI6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 RHOQP3-201ENST00000437982 621 ntBASIC19.98■□□□□ 0.79
SLF1Q9BQI6 AP006288.1-201ENST00000446065 395 ntBASIC19.98■□□□□ 0.79
SLF1Q9BQI6 DNAJB3-202ENST00000449667 1266 ntBASIC19.98■□□□□ 0.79
SLF1Q9BQI6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 YBX1P5-201ENST00000509441 847 ntBASIC19.98■□□□□ 0.79
SLF1Q9BQI6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 PDPK2P-202ENST00000562415 1191 ntBASIC19.98■□□□□ 0.79
SLF1Q9BQI6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 C20orf181-201ENST00000623918 480 ntBASIC19.98■□□□□ 0.79
SLF1Q9BQI6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 LINC00304-203ENST00000565008 1864 ntBASIC19.98■□□□□ 0.79
SLF1Q9BQI6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 BCAR1-209ENST00000546196 1340 ntBASIC19.98■□□□□ 0.79
SLF1Q9BQI6 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLF1Q9BQI6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 KRT19P2-202ENST00000557173 1012 ntBASIC19.97■□□□□ 0.79
SLF1Q9BQI6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLF1Q9BQI6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLF1Q9BQI6 AC006116.8-202ENST00000587620 1550 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms