Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMSS1Q9BQ75 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 PCDHB17P-201ENST00000539533 2393 ntBASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CMSS1Q9BQ75 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 LIN28AP1-201ENST00000429574 405 ntBASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 MTCL1P1-201ENST00000446207 792 ntBASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 AGGF1P2-201ENST00000426656 2106 ntBASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CMSS1Q9BQ75 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 PCDHA14-201ENST00000506751 2298 ntBASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 HLA-F-220ENST00000434407 884 ntBASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 ATP5G1P1-201ENST00000448724 379 ntBASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 AP003733.1-201ENST00000491725 852 ntBASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CMSS1Q9BQ75 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms