Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CPNE1Q99829 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE1Q99829 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.22■□□□□ 0.35
CPNE1Q99829 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE1Q99829 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
CPNE1Q99829 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.22■□□□□ 0.35
CPNE1Q99829 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.22■□□□□ 0.35
CPNE1Q99829 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.22■□□□□ 0.35
CPNE1Q99829 AP005901.3-202ENST00000581653 237 ntBASIC17.22■□□□□ 0.35
CPNE1Q99829 AC073592.5-201ENST00000624854 528 ntBASIC17.22■□□□□ 0.35
CPNE1Q99829 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE1Q99829 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.22■□□□□ 0.35
CPNE1Q99829 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CPNE1Q99829 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE1Q99829 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE1Q99829 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE1Q99829 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE1Q99829 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CPNE1Q99829 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.22■□□□□ 0.35
CPNE1Q99829 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.22■□□□□ 0.35
CPNE1Q99829 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE1Q99829 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE1Q99829 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.22■□□□□ 0.35
CPNE1Q99829 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE1Q99829 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE1Q99829 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.21■□□□□ 0.35
CPNE1Q99829 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE1Q99829 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE1Q99829 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.21■□□□□ 0.35
CPNE1Q99829 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CPNE1Q99829 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.21■□□□□ 0.35
CPNE1Q99829 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE1Q99829 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE1Q99829 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.21■□□□□ 0.35
CPNE1Q99829 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE1Q99829 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE1Q99829 TP73-AS1-210ENST00000637775 1455 ntBASIC17.21■□□□□ 0.35
CPNE1Q99829 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE1Q99829 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE1Q99829 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CPNE1Q99829 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE1Q99829 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE1Q99829 AL031133.1-201ENST00000406807 723 ntBASIC17.21■□□□□ 0.35
CPNE1Q99829 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CPNE1Q99829 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.21■□□□□ 0.35
CPNE1Q99829 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.21■□□□□ 0.35
CPNE1Q99829 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE1Q99829 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CPNE1Q99829 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE1Q99829 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE1Q99829 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE1Q99829 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.21■□□□□ 0.34
CPNE1Q99829 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
CPNE1Q99829 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE1Q99829 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE1Q99829 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CPNE1Q99829 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.2■□□□□ 0.34
CPNE1Q99829 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.2■□□□□ 0.34
CPNE1Q99829 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE1Q99829 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE1Q99829 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.2■□□□□ 0.34
CPNE1Q99829 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CPNE1Q99829 AC016734.2-201ENST00000624325 1377 ntBASIC17.2■□□□□ 0.34
CPNE1Q99829 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE1Q99829 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE1Q99829 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.2■□□□□ 0.34
CPNE1Q99829 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE1Q99829 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE1Q99829 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.2■□□□□ 0.34
CPNE1Q99829 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE1Q99829 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.2■□□□□ 0.34
CPNE1Q99829 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.2■□□□□ 0.34
CPNE1Q99829 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.2■□□□□ 0.34
CPNE1Q99829 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.2■□□□□ 0.34
CPNE1Q99829 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.2■□□□□ 0.34
CPNE1Q99829 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE1Q99829 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.2■□□□□ 0.34
CPNE1Q99829 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.2■□□□□ 0.34
CPNE1Q99829 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.2■□□□□ 0.34
CPNE1Q99829 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.2■□□□□ 0.34
CPNE1Q99829 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.2■□□□□ 0.34
CPNE1Q99829 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE1Q99829 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CPNE1Q99829 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE1Q99829 AC005332.1-201ENST00000577698 1310 ntBASIC17.2■□□□□ 0.34
CPNE1Q99829 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE1Q99829 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.2■□□□□ 0.34
CPNE1Q99829 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE1Q99829 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
CPNE1Q99829 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE1Q99829 AC233702.3-201ENST00000578656 1387 ntBASIC17.19■□□□□ 0.34
CPNE1Q99829 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.19■□□□□ 0.34
CPNE1Q99829 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms