Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP1Q96SZ6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 AC004832.2-201ENST00000426397 482 ntBASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 DNAJB3-201ENST00000446806 729 ntBASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 CXCL1P1-201ENST00000502804 216 ntBASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 AC007064.4-201ENST00000637740 555 ntBASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDK5RAP1Q96SZ6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 KRT18P13-201ENST00000400056 1290 ntBASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDK5RAP1Q96SZ6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 IGLL3P-201ENST00000412472 434 ntBASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 RHOQP3-201ENST00000437982 621 ntBASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 PKD1P1-201ENST00000458669 6805 ntBASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK5RAP1Q96SZ6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP1Q96SZ6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms