Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 NUS1P2-201ENST00000417358 873 ntBASIC16.3■□□□□ 0.2
COL21A1Q96P44 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 FOSL1P1-201ENST00000511041 816 ntBASIC16.3■□□□□ 0.2
COL21A1Q96P44 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 CLEC4GP1-201ENST00000596555 870 ntBASIC16.3■□□□□ 0.2
COL21A1Q96P44 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 AC114341.1-201ENST00000618070 349 ntBASIC16.3■□□□□ 0.2
COL21A1Q96P44 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.3■□□□□ 0.2
COL21A1Q96P44 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL21A1Q96P44 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL21A1Q96P44 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL21A1Q96P44 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL21A1Q96P44 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL21A1Q96P44 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL21A1Q96P44 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL21A1Q96P44 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL21A1Q96P44 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL21A1Q96P44 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL21A1Q96P44 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL21A1Q96P44 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL21A1Q96P44 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 KRT16P4-201ENST00000453883 522 ntBASIC16.29■□□□□ 0.2
COL21A1Q96P44 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 AC002558.1-201ENST00000488906 803 ntBASIC16.29■□□□□ 0.2
COL21A1Q96P44 AC122714.2-201ENST00000502787 707 ntBASIC16.29■□□□□ 0.2
COL21A1Q96P44 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 AL121772.3-201ENST00000610840 674 ntBASIC16.29■□□□□ 0.2
COL21A1Q96P44 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL21A1Q96P44 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL21A1Q96P44 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL21A1Q96P44 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
COL21A1Q96P44 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL21A1Q96P44 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 RCN1P2-201ENST00000398357 915 ntBASIC16.28■□□□□ 0.2
COL21A1Q96P44 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms