Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FGD4Q96M96 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.4■□□□□ 0.7
FGD4Q96M96 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FGD4Q96M96 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FGD4Q96M96 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.4■□□□□ 0.7
FGD4Q96M96 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FGD4Q96M96 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.4■□□□□ 0.7
FGD4Q96M96 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.4■□□□□ 0.7
FGD4Q96M96 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.4■□□□□ 0.7
FGD4Q96M96 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
FGD4Q96M96 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
FGD4Q96M96 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FGD4Q96M96 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
FGD4Q96M96 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.4■□□□□ 0.7
FGD4Q96M96 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.39■□□□□ 0.7
FGD4Q96M96 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
FGD4Q96M96 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.39■□□□□ 0.7
FGD4Q96M96 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FGD4Q96M96 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FGD4Q96M96 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FGD4Q96M96 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FGD4Q96M96 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FGD4Q96M96 FZD10-202ENST00000539839 3282 ntBASIC19.39■□□□□ 0.69
FGD4Q96M96 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
FGD4Q96M96 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FGD4Q96M96 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FGD4Q96M96 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FGD4Q96M96 AL627223.1-201ENST00000416693 442 ntBASIC19.39■□□□□ 0.69
FGD4Q96M96 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FGD4Q96M96 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FGD4Q96M96 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FGD4Q96M96 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.39■□□□□ 0.69
FGD4Q96M96 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.39■□□□□ 0.69
FGD4Q96M96 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.39■□□□□ 0.69
FGD4Q96M96 SPCS2P1-201ENST00000561636 679 ntBASIC19.39■□□□□ 0.69
FGD4Q96M96 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.39■□□□□ 0.69
FGD4Q96M96 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.39■□□□□ 0.69
FGD4Q96M96 AC093512.1-201ENST00000617969 520 ntBASIC19.39■□□□□ 0.69
FGD4Q96M96 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.39■□□□□ 0.69
FGD4Q96M96 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FGD4Q96M96 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FGD4Q96M96 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FGD4Q96M96 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FGD4Q96M96 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
FGD4Q96M96 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
FGD4Q96M96 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.39■□□□□ 0.69
FGD4Q96M96 AC007613.1-201ENST00000572811 2597 ntBASIC19.39■□□□□ 0.69
FGD4Q96M96 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.38■□□□□ 0.69
FGD4Q96M96 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.38■□□□□ 0.69
FGD4Q96M96 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FGD4Q96M96 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
FGD4Q96M96 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FGD4Q96M96 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FGD4Q96M96 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
FGD4Q96M96 AC002056.1-201ENST00000395613 760 ntBASIC19.38■□□□□ 0.69
FGD4Q96M96 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.38■□□□□ 0.69
FGD4Q96M96 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
FGD4Q96M96 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FGD4Q96M96 AL355312.1-201ENST00000407115 2176 ntBASIC19.38■□□□□ 0.69
FGD4Q96M96 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.38■□□□□ 0.69
FGD4Q96M96 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.38■□□□□ 0.69
FGD4Q96M96 TIMM8BP1-201ENST00000452384 211 ntBASIC19.38■□□□□ 0.69
FGD4Q96M96 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.38■□□□□ 0.69
FGD4Q96M96 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.38■□□□□ 0.69
FGD4Q96M96 AC026120.1-201ENST00000611536 926 ntBASIC19.38■□□□□ 0.69
FGD4Q96M96 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
FGD4Q96M96 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.38■□□□□ 0.69
FGD4Q96M96 AL645728.2-201ENST00000641974 660 ntBASIC19.38■□□□□ 0.69
FGD4Q96M96 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FGD4Q96M96 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FGD4Q96M96 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.38■□□□□ 0.69
FGD4Q96M96 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FGD4Q96M96 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FGD4Q96M96 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FGD4Q96M96 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FGD4Q96M96 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FGD4Q96M96 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.37■□□□□ 0.69
FGD4Q96M96 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FGD4Q96M96 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
FGD4Q96M96 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
FGD4Q96M96 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
FGD4Q96M96 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.37■□□□□ 0.69
FGD4Q96M96 FAM8A3P-201ENST00000427218 844 ntBASIC19.37■□□□□ 0.69
FGD4Q96M96 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.37■□□□□ 0.69
FGD4Q96M96 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.37■□□□□ 0.69
FGD4Q96M96 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.37■□□□□ 0.69
FGD4Q96M96 AC004449.1-201ENST00000564240 433 ntBASIC19.37■□□□□ 0.69
FGD4Q96M96 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.37■□□□□ 0.69
FGD4Q96M96 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
FGD4Q96M96 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.37■□□□□ 0.69
FGD4Q96M96 AC009093.7-201ENST00000623853 1223 ntBASIC19.37■□□□□ 0.69
FGD4Q96M96 LINC00628-201ENST00000628516 1289 ntBASIC19.37■□□□□ 0.69
FGD4Q96M96 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FGD4Q96M96 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FGD4Q96M96 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FGD4Q96M96 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FGD4Q96M96 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FGD4Q96M96 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FGD4Q96M96 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FGD4Q96M96 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms