Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AL513190.1-201ENST00000621254 727 ntBASIC18.51■□□□□ 0.55
SNX27Q96L92 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.51■□□□□ 0.55
SNX27Q96L92 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SNX27Q96L92 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNX27Q96L92 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNX27Q96L92 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SNX27Q96L92 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNX27Q96L92 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNX27Q96L92 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.51■□□□□ 0.55
SNX27Q96L92 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.51■□□□□ 0.55
SNX27Q96L92 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNX27Q96L92 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SNX27Q96L92 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX27Q96L92 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX27Q96L92 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX27Q96L92 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.5■□□□□ 0.55
SNX27Q96L92 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.5■□□□□ 0.55
SNX27Q96L92 CROCCP2-202ENST00000412962 2773 ntBASIC18.5■□□□□ 0.55
SNX27Q96L92 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX27Q96L92 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX27Q96L92 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX27Q96L92 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX27Q96L92 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX27Q96L92 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.5■□□□□ 0.55
SNX27Q96L92 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX27Q96L92 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNX27Q96L92 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.5■□□□□ 0.55
SNX27Q96L92 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX27Q96L92 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.5■□□□□ 0.55
SNX27Q96L92 AC107918.2-201ENST00000530817 355 ntBASIC18.5■□□□□ 0.55
SNX27Q96L92 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX27Q96L92 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.5■□□□□ 0.55
SNX27Q96L92 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.5■□□□□ 0.55
SNX27Q96L92 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.5■□□□□ 0.55
SNX27Q96L92 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX27Q96L92 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.5■□□□□ 0.55
SNX27Q96L92 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX27Q96L92 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNX27Q96L92 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNX27Q96L92 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
SNX27Q96L92 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.49■□□□□ 0.55
SNX27Q96L92 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX27Q96L92 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SNX27Q96L92 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX27Q96L92 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX27Q96L92 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX27Q96L92 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX27Q96L92 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.49■□□□□ 0.55
SNX27Q96L92 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
SNX27Q96L92 FAM185BP-201ENST00000443595 716 ntBASIC18.49■□□□□ 0.55
SNX27Q96L92 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX27Q96L92 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNX27Q96L92 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.49■□□□□ 0.55
SNX27Q96L92 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.49■□□□□ 0.55
SNX27Q96L92 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.49■□□□□ 0.55
SNX27Q96L92 AC138761.1-201ENST00000584393 385 ntBASIC18.49■□□□□ 0.55
SNX27Q96L92 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.49■□□□□ 0.55
SNX27Q96L92 ACTL9-202ENST00000612068 1252 ntBASIC18.49■□□□□ 0.55
SNX27Q96L92 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.49■□□□□ 0.55
SNX27Q96L92 AF228730.6-201ENST00000641497 218 ntBASIC18.49■□□□□ 0.55
SNX27Q96L92 AC084121.3-201ENST00000641716 218 ntBASIC18.49■□□□□ 0.55
SNX27Q96L92 AC105233.6-201ENST00000642093 218 ntBASIC18.49■□□□□ 0.55
SNX27Q96L92 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX27Q96L92 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNX27Q96L92 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNX27Q96L92 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX27Q96L92 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX27Q96L92 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.49■□□□□ 0.55
SNX27Q96L92 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.49■□□□□ 0.55
SNX27Q96L92 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX27Q96L92 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.49■□□□□ 0.55
SNX27Q96L92 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX27Q96L92 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.49■□□□□ 0.55
SNX27Q96L92 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.49■□□□□ 0.55
SNX27Q96L92 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNX27Q96L92 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX27Q96L92 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
SNX27Q96L92 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX27Q96L92 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.48■□□□□ 0.55
SNX27Q96L92 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.48■□□□□ 0.55
SNX27Q96L92 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNX27Q96L92 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX27Q96L92 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX27Q96L92 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX27Q96L92 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
SNX27Q96L92 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX27Q96L92 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNX27Q96L92 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SNX27Q96L92 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX27Q96L92 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX27Q96L92 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX27Q96L92 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX27Q96L92 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.48■□□□□ 0.55
SNX27Q96L92 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNX27Q96L92 MCCD1P2-201ENST00000423228 335 ntBASIC18.48■□□□□ 0.55
SNX27Q96L92 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.48■□□□□ 0.55
SNX27Q96L92 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.48■□□□□ 0.55
SNX27Q96L92 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
SNX27Q96L92 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.48■□□□□ 0.55
SNX27Q96L92 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms