Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 AC004790.2-201ENST00000623588 572 ntBASIC17.08■□□□□ 0.32
SCAMP4Q969E2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAMP4Q969E2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAMP4Q969E2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAMP4Q969E2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCAMP4Q969E2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SCAMP4Q969E2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCAMP4Q969E2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.07■□□□□ 0.32
SCAMP4Q969E2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 MIR940-201ENST00000401276 94 ntBASIC17.07■□□□□ 0.32
SCAMP4Q969E2 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 AL645608.8-201ENST00000606034 2086 ntBASIC17.07■□□□□ 0.32
SCAMP4Q969E2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SCAMP4Q969E2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 AC108860.2-201ENST00000562760 2183 ntBASIC17.06■□□□□ 0.32
SCAMP4Q969E2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.06■□□□□ 0.32
SCAMP4Q969E2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCAMP4Q969E2 AL023806.1-201ENST00000603994 1649 ntBASIC17.06■□□□□ 0.32
SCAMP4Q969E2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 AC007967.2-201ENST00000432613 625 ntBASIC17.05■□□□□ 0.32
SCAMP4Q969E2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 MIR4751-201ENST00000578027 74 ntBASIC17.05■□□□□ 0.32
SCAMP4Q969E2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAMP4Q969E2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms