Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AC092865.7-201ENST00000641832 219 ntBASIC16.79■□□□□ 0.28
HIPK4Q8NE63 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.79■□□□□ 0.28
HIPK4Q8NE63 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
HIPK4Q8NE63 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIPK4Q8NE63 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
HIPK4Q8NE63 AC046185.3-201ENST00000623228 1824 ntBASIC16.79■□□□□ 0.28
HIPK4Q8NE63 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIPK4Q8NE63 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIPK4Q8NE63 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.79■□□□□ 0.28
HIPK4Q8NE63 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIPK4Q8NE63 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIPK4Q8NE63 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIPK4Q8NE63 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIPK4Q8NE63 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 LYSMD4-203ENST00000378904 2122 ntBASIC16.78■□□□□ 0.28
HIPK4Q8NE63 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 INGX-201ENST00000359239 846 ntBASIC16.78■□□□□ 0.28
HIPK4Q8NE63 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 SNORA78-201ENST00000459373 127 ntBASIC16.78■□□□□ 0.28
HIPK4Q8NE63 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 NEK4P2-201ENST00000580004 1012 ntBASIC16.78■□□□□ 0.28
HIPK4Q8NE63 MIR3917-201ENST00000580971 93 ntBASIC16.78■□□□□ 0.28
HIPK4Q8NE63 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 AC016396.2-201ENST00000562575 1417 ntBASIC16.78■□□□□ 0.28
HIPK4Q8NE63 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HIPK4Q8NE63 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 AC092068.3-201ENST00000587894 2016 ntBASIC16.77■□□□□ 0.28
HIPK4Q8NE63 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.77■□□□□ 0.28
HIPK4Q8NE63 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HIPK4Q8NE63 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.77■□□□□ 0.27
HIPK4Q8NE63 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.77■□□□□ 0.27
HIPK4Q8NE63 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HIPK4Q8NE63 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIPK4Q8NE63 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HIPK4Q8NE63 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIPK4Q8NE63 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
HIPK4Q8NE63 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.77■□□□□ 0.27
HIPK4Q8NE63 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIPK4Q8NE63 AC078925.2-201ENST00000624013 1973 ntBASIC16.77■□□□□ 0.27
HIPK4Q8NE63 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HIPK4Q8NE63 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms